Transcription factor - DNA binding affinity | Yu Xuhttps://yu-xu.netlify.app/en/tag/transcription-factor-dna-binding-affinity/Transcription factor - DNA binding affinityWowchemy (https://wowchemy.com)en-usSat, 01 Nov 2025 00:00:00 +0000https://yu-xu.netlify.app/media/icon_hu0b7a4cb9992c9ac0e91bd28ffd38dd00_9727_512x512_fill_lanczos_center_3.pngTranscription factor - DNA binding affinityhttps://yu-xu.netlify.app/en/tag/transcription-factor-dna-binding-affinity/TRAFICA: An Open Chromatin Language Model to Improve Transcription Factor Binding Affinity Predictionhttps://yu-xu.netlify.app/en/publication/trafica/Sat, 01 Nov 2025 00:00:00 +0000https://yu-xu.netlify.app/en/publication/trafica/<p> <figure > <div class="d-flex justify-content-center"> <div class="w-100" ><img alt="TRAFICA Framework" srcset=" /en/publication/trafica/featured_huc49af7daacac1a87cbf2938c463c364f_8621987_fb09c4296714d928d81f2adae734acb5.webp 400w, /en/publication/trafica/featured_huc49af7daacac1a87cbf2938c463c364f_8621987_b1431f692d5d8ab665980f62a6b530ff.webp 760w, /en/publication/trafica/featured_huc49af7daacac1a87cbf2938c463c364f_8621987_1200x1200_fit_q99_h2_lanczos_3.webp 1200w" src="https://yu-xu.netlify.app/en/publication/trafica/featured_huc49af7daacac1a87cbf2938c463c364f_8621987_fb09c4296714d928d81f2adae734acb5.webp" width="760" height="606" loading="lazy" data-zoomable /></div> </div></figure> </p> <p>Supplementary: <a href="https://github.com/ericcombiolab/TRAFICA" target="_blank" rel="noopener">source code</a>, <a href="https://huggingface.co/collections/Allanxu/trafica" target="_blank" rel="noopener">model weights</a> and <a href="https://zenodo.org/records/15781226" target="_blank" rel="noopener">training/evaluation data</a>.</p>